MAC-INMV-SSR Database INRA
Home
INMV Typing
Identification of strains Browse Database Downloads References
MLSSR Typing
News Webmasters Contact us

References

Ahlstrom C et al. - Limitations of variable number of tandem repeat typing identified through whole genome sequencing of Mycobacterium avium subsp. paratuberculosis on a national and herd level
BMC Genomics. 2015 Mar 8;16(1):161. [LINK]

Bannantine JP et al. - Genome sequencing of ovine isolates of Mycobacterium avium subspecies paratuberculosis offers insights into host association.
BMC Genomics. 2012 Mar 12;13:89 [LINK]

Barandiaran S et al. - Tuberculosis in swine co-infected with Mycobacterium avium subsp. hominissuis and Mycobacterium bovis in a cluster from Argentina.
Epidemiol Infect. 2015 Apr;143(5):966-74. [LINK]

Biet F et al. - Inter- and intra-subtype genotypic differences that differentiate Mycobacterium avium subspecies paratuberculosis strains.
BMC Microbiol. 2012 Nov 19;12:264 [LINK]

Colombatti Olivieri MA et al. - Protection efficacy of Argentinian isolates of Mycobacterium avium subsp. paratuberculosis with different genotypes and virulence in a murine model.
Res Vet Sci. 2018 Dec;121:4-11 [LINK]

De Kruijf M et al. - Low genetic diversity of bovine Mycobacterium avium subspecies paratuberculosis isolates detected by MIRU-VNTR genotyping.
Vet Microbiol. 2017 May ;203:280-285 [LINK]

Dirac MA et al. - Shared Mycobacterium avium genotypes observed among unlinked clinical and environmental isolates.
Appl Environ Microbiol. 2013 Sep;79(18):5601-7 [LINK]

Douarre PE et al. - Molecular characterization of Mycobacterium avium subsp. paratuberculosis using multi-locus short sequence repeat (MLSSR) and mycobacterial interspersed repetitive units-variable number tandem repeat (MIRU-VNTR) typing methods
Veterinary Microbiology. Volume 149, Issues 3-4, 5 May 2011, Pages 482-487 [LINK]

Eisenberg T et al. - Outbreak of reproductive disorders and mycobacteriosis in swine associated with a single strain of Mycobacterium avium subspecies hominissuis.
Vet Microbiol. 2012 Sep 14;159(1-2):69-76 [LINK]

Fawzy A et al. - First report of MIRU-VNTR genotyping of Mycobacterium avium subsp. paratuberculosis isolates from Egypt.
Iran J Vet Res. 2016 Spring [LINK]

Fawzy A et al. - Genotyping methods and molecular epidemiology of Mycobacterium avium subsp. paratuberculosis (MAP).
Int J Vet Sci Med. 2018 Aug 7;6(2):258-264 [LINK]

Fernández-Silva JA et al. - Genotypes of Mycobacterium avium subsp. paratuberculosis from South American countries determined by two methods based on genomic repetitive sequences.
Trop Anim Health Prod. 2012 Aug;44(6):1123-6 [LINK]

Fernández-Silva JA et al. - Molecular epidemiology of Mycobacterium avium subsp. paratuberculosis at a regional scale in Germany.
Res Vet Sci. 2012 Oct;93(2):776-82 [LINK]

Fernández-Silva JA et al. - Diagnosis and Molecular Characterization of Mycobacterium avium subsp. paratuberculosis from Dairy Cows in Colombia.
Vet Med Int. 2011;2011:352561 [LINK]

Fritsch I et al. - Suspicion of Mycobacterium avium subsp. paratuberculosis transmission between cattle and wild-living red deer (Cervus elaphus) by multitarget genotyping.
Appl Environ Microbiol. 2012 Feb;78(4):1132-9 [LINK]

Galiero A et al. - Mycobacterium aviumsubsp. paratuberculosis isolated from wild red deer (Cervus elaphus) in Northern Italy.
Vet Microbiol. 2018 Apr;217:167-172 [LINK]

Genua F et al. - Genotyping and clarithromycin susceptibility testing of Mycobacterium avium subsp. hominissuis isolated in Tuscany, Italy.
Infect Genet Evol. 2018 Jul 25;65:144-149 [LINK]

Gerritsmann H et al. - Multiple strain infections and high genotypic diversity among Mycobacterium avium subsp. paratuberculosis field isolates from diseased wild and domestic ruminant species in the eastern Alpine region of Austria.
Infect Genet Evol. 2013 Nov 21. pii: S1567-1348(13)00421-8. [LINK]

Gioffré A et al. - Molecular typing of Argentinian Mycobacterium avium subsp. paratuberculosis isolates by multiple-locus variable number-tandem repeat analysis.
Braz J Microbiol. 2015 Jun 1 [LINK]

Imperiale BR et al. - Genetic diversity of Mycobacterium avium complex strains isolated in Argentina by MIRU-VNTR
Epidemiol Infect. 2017 Feb 7:1-10 [LINK]

Kalvisa A et al. - MIRU-VNTR genotype diversity and indications of homoplasy in M. avium strains isolated from humans and slaughter pigs in Latvia.
Infect Genet Evol. 2016 Sep;43:15-21. [LINK]

Möbius P et al. - Evaluation of associations between genotypes of Mycobacterium avium subsp. paratuberculsis and presence of intestinal lesions characteristic of paratuberculosis.
Vet Microbiol. 2017 Mar;201:188-194 [LINK]

Muwonge A et al. - Molecular characterization of Mycobacterium avium subspecies hominissuis isolated from humans, cattle and pigs in the Uganda cattle corridor using VNTR analysis.
Infect Genet Evol. 2014 Jan;21:184-91. [LINK]

Park HT et al. - Genetic diversity of bovine Mycobacterium avium subsp. paratuberculosis discriminated by IS1311 PCR-REA, MIRU-VNTR, and MLSSR genotyping.
Send to J Vet Sci. 2018 Sep 30;19(5):627-634. [LINK]

Pate M et al. - MIRU-VNTR typing of Mycobacterium avium in animals and humans: heterogeneity of Mycobacterium avium subsp. hominissuis versus homogeneity of Mycobacterium avium subsp. avium strains.
Res Vet Sci. 2011 Dec;91(3):376-81 [LINK]

Radomski N et al. - Determination of genotypic diversity of Mycobacterium avium subspecies from human and animal origins by mycobacterial interspersed repetitive-unit-variable-number tandem-repeat and IS1311 restriction fragment length polymorphism typing methods.
J Clin Microbiol. 2010 Apr;48(4):1026-34 [LINK]

Rindi L et al. - High phylogenetic proximity of isolates of Mycobacterium avium subsp. hominissuis over a two decades-period.
Infect Genet Evol. 2013 Jun;16:99-102 [LINK]

Rindi L et al. - Virulence of Mycobacterium avium Subsp. hominissuis Human Isolates in an in vitro Macrophage Infection Model.
Int J Mycobacteriol. 2018 Jan-Mar;7(1):48-52 [LINK]

Scherrer S et al. - Molecular Characterization of Mycobacterium avium subsp. hominissuis of Two Groups of Lymph Nodes, Being Intradermal Tuberculin or Interferon-Gamma Test Positive and Negative, Isolated from Swiss Cattle at Slaughter.
Front Vet Sci. 2018 Mar 5;5:32. [LINK]

Scherrer S et al. - Morphological and Molecular Characterization of a New Mycobacterium avium Subsp. paratuberculosis S-Type Strain Genotype in Goats.
Front Vet Sci. 2019 Jul 31;6:250 [LINK]

Sohal JS et al. - Genetic structure of Mycobacterium avium subspecies paratuberculosis population in Quebec cattle herds revealed by using a combination of multi-locus genomic analysis.
J Clin Microbiol. 2014 May 14. pii: JCM.00386-14 [LINK]

Stevenson K et al. - Occurrence of Mycobacterium avium subspecies paratuberculosis across host species and European countries with evidence for transmission between wildlife and domestic ruminants
BMC Microbiology 2009, 9:212 [LINK]

Subangkit M et al. - Genotyping of swine Mycobacterium avium subsp. hominissuis isolates from Kyushu, Japan.
J Vet Med Sci. 2019 Jun 3. doi: 10.1292 [LINK]

Thibault VC et al. - New variable-number tandem-repeat markers for typing Mycobacterium avium subsp. paratuberculosis and M. avium strains: comparison with IS900 and IS1245 restriction fragment length polymorphism typing.
J Clin Microbiol. 2007 Aug;45(8):2404-10 [LINK]

Tirkkonen T et al. - Comparison of variable-number tandem-repeat markers typing and IS1245 restriction fragment length polymorphism fingerprinting of Mycobacterium avium subsp. hominissuis from human and porcine origins.
Acta Vet Scand. 2010 Mar 10;52:21 [LINK]